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This series of photographs, taken by USGS scientists, demonstrates the value of long-term monitoring to establish base lines and trends.
Over the past few decades, public awareness of the outstanding yet fragile character of these ecosystems has grown, prompting increased state and Federal efforts to protect and preserve the Nation's coral reefs. DOI protects these sensitive habitats at two dozen parks and refuges (fig. 1), collectively amounting to about 3,600,000 acres of coral reefs and other submerged lands. In addition, DOI conducts pioneering scientific research to determine the structure, function, status, and condition of our Nation's coral reefs. However, most of the Nation's coral reefs have not been mapped nor have their conditions been assessed or characterized.
Recent evidence indicates that coral reefs are deteriorating worldwide, and many are in crisis. Symptoms include loss of hard corals, increased abundance of algae, diminished recruitment of coral larvae, reduced biological diversity, and a dramatic increase in bleaching episodes and disease outbreaks. Scientists and managers still lack critical information about the causes, but evidence suggests a variety of human forces, including population increases, shoreline development, increased sediments in the water, trampling by tourists and divers, ship groundings, poor water quality from runoff and inadequate sewage treatment, overfishing, and fishing with poisons and explosives that destroy coral habitat. These stresses act separately and in combination with natural factors, such as hurricanes and disease, to degrade reefs.
Figure 1. DOI holdings with coral reefs; total area with coral reefs and other submerged lands is about 3,628,000 acres (ac). Shaded area is the U.S. Exclusive Economic Zone (200 nautical miles).
| DOI Holding | Total | Area (ac)Emergent | Submergent |
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| National Wildlife Refuges (NWR); U.S. Fish and Wildlife Service |
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| 1. Hawaiian Islands NWR | 611,914 | 1,766 | 610,148 |
| 2. Midway Atoll NWR | 298,369 | 1,549 | 296,820
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| 3. Johnston Atoll NWR | 119,337 | 681 | 118,656 |
| 4. Kingman Reef NWR | 483,705 | 3 | 483,702 |
| 5. Palmyra Atoll NWR | 515,912 | 680 | 515,232 |
| 6. Howland Island NWR | 32,550 | 455 | 32,095 |
| 7. Baker Island NWR | 31,736 | 405 | 31,332 |
| 8. Rose Atoll NWR | 39,066 | 15 | 39,051 |
| 9. Jarvis Island NWR | 37,519 | 1,086 | 36,433 |
| 10. Guam NWR (Ritidian Point only) | 772 | 371 | 401 |
| 11. Key West NWR | 208,308 | 2,019 | 206,289 |
| 12. Great White Heron NWR | 192,584 | 6,297 | 168,287 |
| 13. Navassa Island NWR | 364,950 | 1,285 | 363,665 |
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| National Parks (NP), National Historic Parks (NHP), and National Monuments (NM); National Park Service |
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| 14. War-in-the-Pacific NHP | 1,960 | 958 | 1,002 |
| 15. Kaloko-Honokohau NHP | 1,161 | 661 | 500 |
| 16. Kalaupapa NHP | 10,797 | 8,797 | 2,000 |
| 17. American Samoa NP | 10,520 | 7,970 | 2,550 |
| 18. Biscayne NP | 181,500 | 9,075 | 172,425 |
| 19. Dry Tortugas NP | 64,700 | 39 | 64,661 |
| 20. Salt River Bay NHP | 912 | 312 | 600 |
| 21. Virgin Islands NP | 14,689 | 9,039 | 5,650 |
| 22. Buck Island Reef NM | 19,015 | 176 | 18,839 |
| 23. Virgin Islands Coral Reef NM | 12,708 | 0 | 12,708 |
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| Office of Insular Affairs |
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| 24. Wake Atoll | 429,600 | 1,600 | 428,000 |
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