Abernathy Fish Technology Center
Pacific Region
 

Publications List 1995 - present

Current and former staff names are in bold. Please note that citations without volume and page numbers are published online.


2014
Banks, M. A., D. P. Jacobson, I. Meusnier, C. A. Greig, V. K. Rashbrook, W. R. Ardren, C. T. Smith, J. Bernier-Latmani, J. Van Sickle, and K. G. O'Malley. 2014. Testing advances in molecular discrimination among Chinook salmon life histories: evidence from a blind test. Animal Genetics 45(3):412-420.

Bingham, D. M., B. M. Kennedy, K. C. Hanson, and C. T. Smith. 2014. Loss of genetic integrity in hatchery steelhead produced by juvenile-based production and wild integration: conflicts in production and conservation goals. North American Journal of Fisheries Management 34(3):609-620.

DeHaan, P., B. Adams, R. Taber, D. Hawkins and B. Thompson. 2014. Historical and contemporary forces shape genetic variation in the Olympic mudminnow (Novumbra hubbsi), an endemic fish from Washington State, USA. Conservation Genetics. DOI 10.1007/s10592-014-0627-7.

DeHaan, P. W., C. Pascal, and J. E. Seeb. 2014. Novel SNP genotyping assays facilitate species identification of Salvelinus collected in a recreational fishery. North American Journal of Fisheries Management 143:164–172.

Eya, J. C., R. Yossa, M. F. Ashame, C. F. Pomeroy, and A. L. Gannam. 2014. Effects of dietary lipid levels on mitochondrial gene expression in low and high-feed efficient families of rainbow trout Oncorhynchus mykiss. Journal of Fish Biology 84:1708-1720.

Glenn, R. A., A. L. Gannam, and S. E. LaPatra. 2014. The lack of effectiveness of rosemary oil on fish feed in controlling bacterial cold-water disease in rainbow trout. North American Journal of Aquaculture 76:359-363.

Peterson, D. P., B. E. Rieman, D. L. Horan, and M. K. Young. 2014. Patch size but not short-term isolation influences occurrence of westslope cutthroat trout above human-made barriers. Ecology of Freshwater Fish 23(4):556–571.

Smith, C. T., R. French, J. Lovtang, and D. Hand. 2014. Genetic Composition of the Warm Springs River Chinook Salmon Population Maintained following Eight Generations of Hatchery Production. Transactions of the American Fisheries Society:1280-1294.

Sutherland, B. J. G., K. C. Hanson, J. R. Jantzen, B. F. Koop, and C. T. Smith. 2014. Divergent immunity and energetic programs in the gills of migratory and resident Oncorhynchus mykiss. Molecular Ecology 23(8):1952-1964.

Zydlewski, J., G. Zydlewski, B. Kennedy, and W. Gale. 2014. Smolting in coastal cutthroat trout Onchorhynchus clarkii clarkii. Journal of Fish Biology. DOI: 10.1111/jfb.12480.

2013
Adams, B., R. Tabor, B. Thompson, P. W. DeHaan, and D. K. Hawkins. 2013. Characterization of tetranucleotide microsatellite loci for Olympic mudminnow (Novumbra hubbsi). Conservation Genetics Resources 5(2):573-575.

Compton, M. T., C. M. Taylor. 2013. Spatial scale effects on habitat associations of the ashy darter, Etheostoma cinereum, an imperiled fish in the southeast United States. Ecology of Freshwater Fish 22:178-191.

Cooke, S. J., M. R. Donaldson, C. M. O'Connor, G. D. Raby, R. Arlinghaus, A. J. Danylchuk, K. C. Hanson, S. G. Hinch, T. D. Clark, D. A. Patterson, and C. D. Suski. 2013. The physiological consequences of catch-and-release angling: perspectives on experimental design, interpretation, extrapolation, and relevance to stakeholders. Fisheries Management and Ecology 20:268-287.

DeHaan, P. W., and S. R. Bernall. 2013. Spawning success of bull trout transported above mainstem Clark Fork River dams in Idaho and Montana. North American Journal of Fisheries Management 33(6):1269-1282.

Eya, J. C., R. Yossa, M. F. Ashame, C. F. Pomeroy, and A. L. Gannam. 2013. Effects of dietary lipid levels on growth, feed utilization and mitochondrial function in low- and high-feed efficient families of rainbow trout (Oncorhynchus mykiss). Aquaculture 416-417:119-128.

Hanson, K. C., and K. G. Ostrand. 2013. Evaluation of transmitter application techniques for use in research of adult eulachon, Thaleichthys pacificus. North American Journal of Fisheries Management 33:1119-1124.

Hill, H., R. Twibell, J. Conway, A. Gannam, and J. Seals. 2013. Influence of lineage, broodstock conditioning, and hormone injection on Gila trout reproductive success and egg fatty acid composition. North American Journal of Aquaculture 75(3):393-403.

Miyazono, S. and C. M. Taylor. 2013. Effects of habitat size and isolation on species immigration-extinction dynamics and community nestedness in a desert river system. Freshwater Biology.

Moran, P., D. J. Teel, M. A. Banks, T. D. Beacham, M. R. Bellinger, S. M. Blankenship, J. R. Candy, J. C. Garza, J. E. Hess, S. R. Narum, L. W. Seeb, W. D. Templin, C. G. Wallace, and C. T. Smith. 2013. Divergent life-history races do not represent Chinook salmon coast-wide: the importance of scale in Quaternary biogeography. Canadian Journal of Fisheries and Aquatic Sciences 70:415-435.

Peterson, D. P., S. J. Wenger, B. E. Rieman, and D. J. Isaak. 2013. Linking climate change and fish conservation efforts using spatially explicit decision support tools. Fisheries 38(3):112-127.

Peterson, D. P., B. E. Rieman, D. L. Horan, and M. K. Young. 2013. Patch size but not short-term isolation influences occurrence of westslope cutthroat trout above human-made barriers. Ecology of Freshwater Fish, doi: 10.1111/eff.12108

Roberts, J. J., K. D. Fausch, D. P. Peterson, and M. B. Hooten. 2013. Fragmentation and thermal risks from climate change interact to affect persistence of native trout in the Colorado River basin. Global Change Biology 19(5):1383-1398.

Trosvik, K. A., C. D. Webster, K. R. Thompson, L. A. Metts, A. Gannam, and R. Twibell. 2013. Effects on growth performance and body composition in Nile tilapia, Oreochromis niloticus, fry fed organic diets containing yeast extract and soybean meal as a total replacement of fish meal without amino acid supplementation. Biological Agriculture & Horticulture 29(3):173-185.

2012
Barron, J. M., N. R. Jensen, P. J. Anders, J. P. Egan, S. C. Ireland, and K. D. Cain. 2012. Effects of temperature on the intensive culture performance of larval and juvenile North American burbot (Lota lota maculosa). Aquaculture 364-365:67-73.

Beaulaurier, J., N. Bickford, J. L. Gregg, C. A. Grady, A. L. Gannam, J. R. Winton, and P. K. Hershberger. 2012. Susceptibility of pacific herring to viral hemorrhagic septicemia is influenced by diet. Journal of Aquatic Animal Health 24(1):43-48.

Braaten, P. J., D. B. Fuller, R. D. Lott, T. M. Haddix, L. D. Holte, R. H. Wilson, M. L. Bartron, J. A. Kalie, P. W. DeHaan, W. Ardren, R. J. Holm, and M. E. Jaeger. 2012. Natural growth and diet of known-age pallid sturgeon (Scaphirhynchus albus) early life stages in the upper Missouri River basin, Montana and North Dakota. Journal of Applied Ichthyology:1-9.

Colburn, H. R., A. B. Walker, T. S. Breton, J. M. Stilwell, I. F. Sidor, A. Gannam, and D. L. Berlinsky. 2012. Partial replacement of fishmeal with soybean meal and soy protein concentrate in diets of Atlantic cod. North American Journal of Aquaculture 74(3):330-337.

DeHaan, P. W., P. D. Scheerer, R. Rhew, and W. Ardren. 2012. Analysis of genetic variation in populations of Oregon Chub, a threatened floodplain minnow in a highly altered envrionment. Transactions of the American Fisheries Society 141(2):533-549.

Hanson, K. C., K. G. Ostrand, and R. A. Glenn. 2012. Physiological correlates of habitat utilization by migrating juvenile Chinook salmon (Oncorhynchus tshawytscha) in the lower Columbia River. Comparative Biochemistry and Physiology Part A: Molecular & Integrative Physiology. 163:343-349.

Nielsen, J. K., G. H. Niezgoda, S. J. Taggart, S. J. Cooke, P. Anson, C. T. Hasler, K. C. Hanson, and G. Carl. 2012. Mobile positioning of tagged aquatic animals using a synthetic hydrophone array (SYNAPS: Synthetic Aperture Positioning System). American Fisheries Society Symposium Proceedings, Advances in Fish Tagging and Marking Technology. American Fisheries Society, Bethesda, MD.

Ostrand, K. G., G. B. Zydlewski, W. L. Gale, and J. D. Zydlewski. 2012a. Long term retention, survival, growth, and physiological indicators of salmonids marked with passive integrated transponder tags. Symposium Proceedings Advances in Fish Tagging and Marking Technology. American Fisheries Society, Bethesda, Maryland, Bethesda, MD.

Ostrand, S., R. A. Glenn, A. Gannam, and K. C. Hanson. 2012b. Inhibitory effects of rosemary oil on the in vitro growth of six common finfish pathogens. North American Journal of Aquaculture 74(2):230-234.

Simpson, W. G., and K. G. Ostrand. 2012. Effects of entrainment and bypass at screened irrigation canals on juvenile steelhead. Transactions of the American Fisheries Society 141(3):599-609.

Thompson, K. R., A. Velasquez, J. T. Patterson, L. S. Metts, C. D. Webster, Y. J. Brady, A. L. Gannam, R. G. Twibell, and S. L. Ostrand. 2012. Evaluation of plant and animal protein sources as partial or total replacement of fish meal in diets for Nile tilapia fry and juvenile stages. North American Journal of Aquaculture 74(3):365-375.

Trosvik, K. A., S. D. Rawles, K. R. Thompson, L. A. Metts, A. Gannam, R. G. Twibell, and C. D. Webster. 2012. Growth and body composition of Nile tilapia, Oreochromis niloticus, fry fed organic diets containing yeast extract and soybean meal as replacements for fish meal, with and without supplemental lysine and methionine. Journal of the World Aquaculture Society 43 (5):635-647.

Twibell, R. G., A. L. Gannam, N. M. Hyde, J. S. A. Holmes, and J. B. Poole. 2012. Effects of fish meal- and fish oil-free diets on growth responses and fatty acid composition of juvenile coho salmon (Oncorhynchus kisutch). Aquaculture 360-361:69-77.

2011
Ardren, W. R., P. W. DeHaan, C. T. Smith, E. B. Taylor, R. Leary, C. C. Kozfkay, L. Godfrey, M. Diggs, W. Fredenberg, J. Chan, C. W. Kilpatrick, M. P. Small, and D. K. Hawkins. 2011. Genetic structure, evolutionary history, and conservation units of bull trout in the coterminous United States. Transactions of the American Fisheries Society 140(2):506-525.

DeHaan, P. W., S. B. Bernall, J. M. DosSantos, L. L. Lockard, and W. Ardren. 2011a. Use of genetic markers to aid in re-establishing migratory connectivity in a fragmented metapopulation of bull trout (Salvelinus confluentus). Canadian Journal of Fisheries and Aquatic Sciences 68:1952-1969.

DeHaan, P. W., S. J. Brenkman, B. Adams, and P. Crain. 2011b. Genetic population structure of Olympic Peninsula bull trout populations and implications for Elwha Dam removal. Northwest Science 85(3):463-475.

Glenn, R. A., P. W. Taylor, and K. C. Hanson. 2011. The use of a real-time PCR primer/probe set to observe infectivity of Yersinia ruckeri in Chinook salmon, Oncorhynchus tshawytscha (Walbaum), and steelhead trout, Oncorhynchus mykiss (Walbaum). Journal of Fish Diseases 34(10):783-791.
Gomez-Uchida, D., J. E. Seeb, M. J. Smith, C. Habicht, T. P. Quinn, and L. W. Seeb. 2011. Single nucleotide polymorphisms unravel hierarchical divergence and signatures of selection among Alaskan sockeye salmon (Oncorhynchus nerka) populations. Bmc Evolutionary Biology 11.

Hanson, K. C., W. L. Gale, W. G. Simpson, B. M. Kennedy, and K. G. Ostrand. 2011. Physiological characterization of hatchery origin juvenile steelhead (Oncorhynchus mykiss) adopting divergent life history strategies. Journal of Fish and Wildlife Management 1:61-71.

Hanson, K. C., and K. G. Ostrand. 2011. Potential effects of global climate change on National Fish Hatchery operations in the Pacific Northwest, USA. Aquaculture Environment Interactions 1(3):175-186.

McGlauflin, M. T., D. E. Schindler, L. W. Seeb, C. T. Smith, C. Habicht, and J. E. Seeb. 2011. Spawning habitat and geography influence population structure and juvenile migration timing of sockeye salmon in the Wood River Lakes, Alaska. Transactions of the American Fisheries Society 140(3):763-782.

Metts, L. S., S. D. Rawles, Y. J. Brady, K. R. Thompson, A. L. Gannam, R. G. Twibell, and C. D. Webster. 2011. Amino acid availability from selected animal- and plant-derived feedstuffs for market-size sunshine bass (Morone chrysops x Morone saxatilis). Aquaculture Nutrition 17(2):E123-E131.

Muhlfeld, C. C., J. J. Giersch, F. R. Hauer, G. T. Pederson, G. Luikart, D. P. Peterson, and C. C. Downs. 2011. Climate change links fate of glaciers and an endemic alpine invertebrate. Climatic Change Letters 106:337-345.
Paquet, P. J., T. Flagg, A. Appleby, J. Barr, L. Blankenship, D. Campton, M. Delarm, T. Evelyn, D. Fast, J. Gislason, P. Kline, D. Maynard, L. Mobrand, G. Nandor, P. Seidel, and S. Smith. 2011. Hatcheries, Conservation, and Sustainable Fisheries—Achieving Multiple Goals: Results of the Hatchery Scientific Review Group's Columbia River Basin Review. Fisheries 36(11):547-561.

Rawles, S. D., K. R. Thompson, Y. J. Brady, L. S. Metts, M. Y. Aksoy, A. L. Gannam, R. G. Twibell, S. Ostrand, and C. D. Webster. 2011. Effects of replacing fish meal with poultry by-product meal and soybean  meal and reduced protein level on the performance and immune status of pond-grown sunshine bass (Morone chrysops X M. saxatilis). Aquaculture Nutrition 17(3):708-721.

Ruff, C. P., D. E. Schindler, J. B. Armstrong, K. T. Bentley, G. T. Brooks, G. W. Holtgrieve, M. T. McGlauflin, C. E. Torgerson, and J. E. Seeb. 2011. Temperature-associated population diversity in salmon confers benefits to mobile consumers. Ecology 92(11):2073-2084.

Smith, C. T., and R. Engle. 2011. Persistent reproductive isolation between sympatric lineages of fall Chinook salmon in White Salmon River, Washington. Transactions of the American Fisheries Society 140(3):699-715.

Smith, C. T., S. B. Reid, L. Godfrey, and W. R. Ardren. 2011a. Gene flow among Modoc sucker and Sacramento sucker populations in the upper Pit River. Journal of Fish and Wildlife Management 2:72-84.

Smith, M. J., C. E. Pascal, A. C. Grauvogel, C. Habicht, J. E. Seeb, and L. W. Seeb. 2011b. Multiplex preamplification PCR and microsatellite validation enables accurate single nucleotide polymorphism genotyping of historical fish scales. Molecular Ecology Resources 11(Issue supplement s1):268-277.

Twibell, R. G., A. L. Gannam, S. L. Ostrand, J. S. A. Holmes, and J. B. Poole. 2011. Altered growth rates, carcass fatty acid concentrations, and tissue histology in first-feeding steelhead fed a fish-meal- and fish-oil-free diet. North American Journal of Aquaculture 73(2):230-238.

2010
Ardren, W. R., J. Baumsteiger, and C. S. Allen. 2010. Genetic analysis and uncertain taxonomic status of threatened Foskett Spring speckled dace. Conservation Genetics 11(4):1299-1315.

DeHaan, P. W., L. T. Schwabe, and W. R. Ardren. 2010. Spatial patterns of hybridization between bull trout, Salvelinus confluentus, and brook trout, Salvelinus fontinalis in an Oregon stream network. Conservation Genetics 11(3):935-949.

Donaldson, M. R., C. T. Hasler, K. C. Hanson, T. D. Clark, S. G. Hinch, and S. J. Cooke. 2010. Injecting youth into peer-review to increase its sustainability: a case study of ecology journals. Ideas in Ecology and Evolution 3:1-7.

Hanson, K. C., C. T. Hasler, M. R. Donaldson, and S. J. Cooke. 2010a. Stability of swimming performance and activity hierarchies among wild largemouth bass at multiple temporal scales: evidence for context-dependent shuffling between seasons. Canadian Journal of Zoology-Revue Canadienne De Zoologie 88(3):324-333.

Hanson, K. C., K. G. Ostrand, A. L. Gannam, and S. L. Ostrand. 2010b. Comparison and validation of nonlethal techniques for estimating condition in juvenile salmonids. Transactions of the American Fisheries Society 139(6):1733-1741.

Holliman, F. M., J. B. Reynolds, and J. A. S. Holmes. 2010. Effects of healing time and pulsed-DC waveform on injury detection and incidence in electroshocked juvenile chinook salmon. North American Journal of Fisheries Management 30(6):1413-1419.

Johnson, J. R., J. Baumsteiger, J. Zydlewski, J. M. Hudson, and W. Ardren. 2010. Evidence of panmixia between sympatric life history forms of coastal cutthroat trout in two lower Columbia River tributaries. North American Journal of Fisheries Management 30(3):691-701.

O'Toole, A. C., K. J. Murchie, C. Pullen, K. C. Hanson, C. D. Suski, A. J. Danylchuk, and S. J. Cooke. 2010. Locomotory activity and depth distribution of adult great barracuda (Sphyraena barracuda) in Bahamian coastal habitats determined using acceleration and pressure biotelemetry transmitters. Marine and Freshwater Research 61(12):1446-1456.

Olsen, J. B., T. D. Beacham, M. Wetklo, L. W. Seeb, C. T. Smith, B. G. Flannery, and J. K. Wenburg. 2010. The influence of hydrology and waterway distance on population structure of Chinook salmon Oncorhynchus tshawytscha in a large river. Journal of Fish Biology 76(5):1128-1148.

Rawles, S. D., K. R. Thompson, Y. J. Brady, L. S. Metts, A. L. Gannam, R. G. Twibell, and C. D. Webster. 2010. A comparison of two faecal collection methods for protein and amino acid digestibility coefficients of menhaden fish meal and two grades of poultry by-product meals for market-size sunshine bass (Morone chrysops x M. saxatilis). Aquaculture Nutrition 16(1):81-90.

Siepker, M. J., K. G. Ostrand, E. L. Ball, and D. H. Wahl. 2010. Electrofishing practices have limited effects on largemouth bass feeding behavior. North American Journal of Fisheries Management 30(6):1395-1400.

Walker, R. P., A. O'Toole, Z. Whynot, K. C. Hanson, and S. J. Cooke. 2010. Evaluation of the aquatic habitat and fish assemblage in an urban reach of the historic Rideau Canal, Ottawa, Canada: Implications for management in an engineered system. Urban Ecosystems 13:563-582.

Baumsteiger, J., and J. L. Kerby. 2009. Effectiveness of salmon carcass tissue for use in DNA extraction and amplification in conservation genetic studies. North American Journal of Fisheries Management 29(1):40-49.

2009
Cooke, S. J., K. C. Hanson, and C. D. Suski. 2009. Contemporary issues in centrarchid conservation and management. Pages 340-374 in S. J. Cooke, and D. P. Philipp, editors. Centrarchid Fishes:  Diversity, Biology and Conservation. Wiley-Blackwell, Hoboken, NJ.

Gale, W. L., C. R. Pasley, B. M. Kennedy, and K. G. Ostrand. 2009. Juvenile steelhead release strategies: a comparison of volitional- and forced-release practices. North American Journal of Aquaculture 71(2):97-106.

Hanson, K. C., A. Abizaid, and S. J. Cooke. 2009. Causes and consequences of voluntary anorexia during the parental care period of wild male smallmouth bass (Micropterus dolomieu). Hormones and Behavior 56(5):503-509.

Kennedy, B. M., J. Baumsteiger, W. L. Gale, W. R. Ardren, and K. G. Ostrand. 2009. Morphological, physiological, and genetic techniques for improving field identification of steelhead trout, coastal cutthroat trout, and hybrid smolts. Marine and Coastal Fisheries: Dynamics, Management, and Ecosystem Science 1(1):45-56.

Matala, A. P., R. French, E. Olsen, and W. R. Ardren. 2009. Ecotype distinctions among Steelhead in Hood River, Oregon, allow real-time genetic assignment of conservation broodstocks. Transactions of the American Fisheries Society 138(6):1490-1509.

Onders, R. J., S. D. Mims, C. D. Webster, and A. L. Gannam. 2009. Apparent digestibility coefficients of protein, lipid and carbohydrate in practical diets fed to paddlefish, Polyodon spathula (Walbaum). Aquaculture Research 40(15):1785-1788.

Ostrand, K. G., W. G. Simpson, C. D. Suski, and B. A. J. 2009. Behavioral and physiological response of white sturgeon to an electrical sea lion barrier system. Marine and Coastal Fisheries: Dynamics, Management, and Ecosystem Science (1):363-377.

Peterson, D. P., and W. R. Ardren. 2009. Ancestry, population structure, and conservation genetics of Arctic grayling (Thymallus arcticus) in the upper Missouri River, USA. Canadian Journal of Fisheries and Aquatic Sciences 66(10):1758-1774.

Simpson, W. G. 2009. American Pikas inhabit low-elevation sites outside the species' previously described bioclimatic envelope. Western North American Naturalist 69(2):243-250.

Simpson, W. G., B. M. Kennedy, and K. G. Ostrand. 2009. Seasonal foraging and piscivory by sympatric wild and hatchery-reared steelhead from an integrated hatchery program. Environmental Biology of Fishes 86(4):473-482.

Stephenson, J. J., M. R. Campbell, J. E. Hess, C. Kozfkay, A. P. Matala, M. V. McPhee, P. Moran, S. R. Narum, M. M. Paquin, O. Schlei, M. P. Small, D. M. Van Doornik, and J. K. Wenburg. 2009. A centralized model for creating shared, standardized, microsatellite data that simplifies inter-laboratory collaboration. Conservation Genetics 10(4):1145-1149.
Taylor, P. W., C. E. Smith, and M. J. Blair. 2009. Polycystic lesions in the liver of the white sturgeon. Journal of Aquatic Animal Health 21(1):57-59.

Twibell, R. G., A. L. Gannam, S. L. Ostrand, J. S. A. Holmes, and J. B. Poole. 2009. Evaluation of commercial diets for first-feeding spring chinook salmon. North American Journal of Aquaculture 71(2):116-121.

Zydlewski, G. B., J. Zydlewski, and J. Johnson. 2009. Patterns of migration and residency in coastal cutthroat trout Oncorhynchus clarkii clarkii from two tributaries of the lower Columbia River. Journal of Fish Biology 75(1):203-222.

2008
Baumsteiger, J., D. M. Hand, D. E. Olson, R. Spateholts, G. FrrzGerald, and W. R. Ardren. 2008. Use of parentage analysis to determine reproductive success of hatchery-origin spring chinook salmon outplanted into Shitike Creek, Oregon. North American Journal of Fisheries Management 28(5):1472-1485.

Celedonia, M. T., R. A. Tabor, S. Damm, D. W. Lantz, T. M. Lee, Z. Li, B. E. Price, W. Gale, and K. G. Ostrand. 2008. Movement and habitat use of Chinnok salmon smolts, Northern Pikeminnow, and Smallmouth bass near SR 520 Bridge.

DeHaan, P. W., G. R. Jordan, and W. R. Ardren. 2008. Use of genetic tags to identify captive-bred pallid sturgeon (Scaphirhynchus albus) in the wild: improving abundance estimates for an endangered species. Conservation Genetics 9(3):691-697.

Diggs, M. D., and W. R. Ardren. 2008. Characterization of 12 highly variable tetranucleotide microsatellite loci for Arctic grayling (Thymallus arcticus) and cross amplification in other Thymallus species. Molecular Ecology Resources 8(4):828-830.

Gannam, A. L. 2008. Feeding activity in teleost fish: influence of biotic and abiotic factors. Pages 67-84 in J. E. P. Cyrino, D. Bureau, and B. G. Kapoor, editors. Feeding and digestive functions of fishes. Science Publishers, Inc., Enfield, New Hampshire.

Kassler, T. W., D. K. Hawkins, and J. M. Tipping. 2008. Summer-run ahtchery steelhead have naturalized in the South Fork Skykomish River, Washington. Transactions of the American Fisheries Society 137(3):763-771.

Matala, A. P., S. Marx, and T. G. Wise. 2008. A genetically distinct wild redband trout (Oncorhynchus mykiss gairdneri) population in Crane Prairie Reservoir, Oregon, persists despite extensive stocking of hatchery rainbow trout (O. mykiss irideus). Conservation Genetics 9(6):1643-1652.

Reimchen, T. E., R. J. Nelson, and C. T. Smith. 2008. Estimating deer colonization rates to offshore islands of Haida Gwaii, British Columbia, using microsatellite markers. Pages 117-120 in A. J. Gaston, T. E. Golumbia, J. L. Martin, and S. T. Sharpe, editors. Lessons from the Islands. Canadian Wildlife Service Special Publications.
Smith, C. T., and L. W. Seeb. 2008. Number of alleles as a predictor of the relative assignment accuracy of short tandem repeat (STR) and single-nucleotide-polymorphism (SNP) baselines for chum salmon. Transactions of the American Fisheries Society 137(3):751-762.

Taylor, P. W., and R. A. Glenn. 2008. Toxicity of five therapeutic compounds on juvenile salmonids. North American Journal of Aquaculture 70(2):175-183.

Thompson, K. R., S. D. Rawles, L. S. Metts, R. Smith, A. Wimsatt, A. L. Gannam, R. G. Twibell, R. B. Johnson, Y. J. Brady, and C. D. Webster. 2008. Digestibility of dry matter, protein, lipid, and organic matter of two fish meals, two poultry by-product meals, soybean meal, and distiller's dried grains with solubles in practical diets for sunshine bass, Morone chrysops x M. saxatilis. Journal of the World Aquaculture Society 39(3):352-363.

Zydlewski, G. B., W. Gale, J. Holmes, J. Johnson, T. Brigham, and W. Thorson. 2008. Use of electroshock for euthanizing and immobilizing adult spring chinook salmon in a hatchery. North American Journal of Aquaculture 70(4):415-424.

2007
Araki, H., W. R. Ardren, E. Olsen, B. Cooper, and M. S. Blouin. 2007a. Reproductive success of captive-bred steelhead trout in the wild: Evaluation of three hatchery programs in the Hood River. Conservation Biology 21(1):181-190.

Araki, H., R. S. Waples, W. R. Ardren, B. Cooper, and M. S. Blouin. 2007b. Effective population size of steelhead trout: influence of variance in reproductive success, hatchery programs, and genetic compensation between life-history forms. Molecular Ecology 16(5):953-966.

Ardren, W. R., L. Amata, J. Whelan, and P. W. Dehaan. 2007. Characterization of 16 highly variable tetranucleotide microsatellite loci for Oregon chub (Oregonichthys crameri) and cross amplification in Umpqua chub (O. kalawatseti). Molecular Ecology Notes 7(5):808-810.

Cooke, S. J., C. D. Suski, K. G. Ostrand, D. H. Wahl, and D. P. Philipp. 2007. Physiological and behavioral consequences of long-term artificial selection for vulnerability to recreational angling in a teleost fish. Physiological and Biochemical Zoology 80(5):480-490.

DeHaan, P. W., C. A. Barfoot, and W. R. Ardren. 2007. Genetic analysis of bull trout populations on the Flathead Indian Reservation, Montana. Pages 145-153 in Wild Trout Symposium IX - Sustaining Wild Trout in a Changing World (2007).

Hard, J. J., D. G. Elliott, R. J. Pascho, D. M. Chase, L. K. Park, J. R. Winton, and D. E. Campton. 2007. Potential trade-offs in resistance of chinook salmon (Oncorhynchus tshawyacha) to two bacterial pathogens resulting from selection of broodstock based on antigen level. Aquaculture 272:S267-S267.

Jorstad, K. E., C. T. Smith, Z. Grauvogel, and L. Seeb. 2007. The genetic variability of the red king crab, Paralithodes camtschatica (Tilesius, 1815) (Anomura, Lithodidae) introduced into the Barents Sea compared with samples from the Bering Sea and Kamchatka region using eleven microsatellite loci. Hydrobiologia 590:115-121.

Kennedy, B. M., W. L. Gale, and K. G. Ostrand. 2007a. Relationship between smolt gill Na+, K+ ATPase activity and migration timing to avian predation risk of steelhead trout (Oncorhynchus mykiss) in a large estuary. Canadian Journal of Fisheries and Aquatic Sciences 64(11):1506-1516.

Kennedy, B. M., W. L. Gale, and K. G. Ostrand. 2007b. Evaluation of clove oil concentrations for use as an anesthetic during field processing and passive integrated transponder implantation of juvenile steelhead. Northwest Science 81(2):147-154.

Maule, A. G., A. L. Gannam, and J. W. Davis. 2007. Chemical contaminants in fish feeds used in federal salmonid hatcheries in the USA. Chemosphere 67(7):1308-1315.

Seeb, L. W., A. Antonovich, A. A. Banks, T. D. Beacham, A. R. Bellinger, S. M. Blankenship, A. R. Campbell, N. A. Decovich, J. C. Garza, C. M. Guthrie, T. A. Lundrigan, P. Moran, S. R. Narum, J. J. Stephenson, K. J. Supernault, D. J. Teel, W. D. Templin, J. K. Wenburg, S. E. Young, and C. T. Smith. 2007. Development of a standardized DNA database for Chinook salmon. Fisheries 32(11):540-552.

Siepker, M. J., K. G. Ostrand, S. J. Cooke, D. P. Philipp, and D. H. Wahl. 2007. A review of the effects of catch-and-release angling on black bass, Micropterus spp.: implications for conservation and management of populations. Fisheries Management and Ecology 14(2):91-101.

Smith, C. T., A. Antonovich, W. D. Templin, C. M. Elfstrom, S. R. Narum, and L. W. Seeb. 2007. Impacts of marker class bias relative to locus-specific variability on population inferences in Chinook salmon: A comparison of single-nucleotide polymorphisms with short tandem repeats and allozymes. Transactions of the American Fisheries Society 136(6):1674-1687.

2006
DeHaan, P. W., S. V. Libants, R. F. Elliott, and K. T. Scribner. 2006. Genetic population structure of remnant lake sturgeon populations in the upper Great Lakes basin. Transactions of the American Fisheries Society 135(6):1478-1492.

Gannam, A. L. 2006. Captive broodstock nutrition: what are we forgetting? Pages 21-22 in B. Berejikian, and C. Nash, editors. Proceedings of the Workshop on Captive Broodstocks for Recovery of Imperiled Salmonid Populations. National Marine Fisheries Service, Northwest Fisheries Science Center, Resource Enhancement and Utilization Technologies Division, Manchester Research Station, Manchester, WA, Gig Harbor, WA.

Gill, N., D. A. Higgs, B. J. Skura, M. Rowshandeli, B. S. Dosanjh, J. Mann, and A. L. Gannam. 2006. Nutritive value of partially dehulled and extruded sunflower meal for post-smolt Atlantic salmon (Salmo salar L.) in sea water. Aquaculture Research 37(13):1348-1359.

Glenn, R. A., and P. W. Taylor. 2006. Population thinning to control furunculosis in steelhead. North American Journal of Aquaculture 68(4):355-358.

Hard, J. J., D. G. Elliott, R. J. Pascho, D. M. Chase, L. K. Park, J. R. Winton, and D. E. Campton. 2006. Genetic effects of ELISA-based segregation for control of bacterial kidney disease in Chinook salmon (Oncorhynchus tshawytscha). Canadian Journal of Fisheries and Aquatic Sciences 63(12):2793-2808.

Henne, J. P., M. M. Romero, T. V. Martinez, B. M. Fillmore, A. L. Gannam, and G. J. Carmichael. 2006. Performance of endangered bonytails fed four commercial diets. North American Journal of Aquaculture 68(3):217-223.

Kennedy, B. M., B. W. Thompson, and C. Luecke. 2006. Ecological differences between two closely related morphologically similar benthic whitefish (Prosopium spilonotus and Prosopium abyssicola) in an endemic whitefish complex. Canadian Journal of Fisheries and Aquatic Sciences 63(8):1700-1709.

Ostrand, K. G., M. J. Siepker, and S. J. Cooke. 2006. Capture efficiencies of two hook types and associated injury and mortality of juvenile muskellunge angled with live baitfish. North American Journal of Fisheries Management 26(3):622-627.

Siepker, M. J., K. G. Ostrand, and D. H. Wahl. 2006a. Effects of angling on feeding by largemouth bass. Journal of Fish Biology 69(3):783-793.

Siepker, M. J., D. H. Wahl, D. P. Philipp, and K. G. Ostrand. 2006b. Evidence of reduced reproductive success of nesting largemouth bass sampled with standard electrofishing procedures. North American Journal of Fisheries Management 26(3):631-635.

Zydlewski, G. B., G. Horton, T. Dubreuil, B. Letcher, S. Casey, and J. Zydlewski. 2006. Remote monitoring of fish in small streams: A unified approach using PIT tags. Fisheries 31(10):492-502.

2005
Baumsteiger, J., D. Hankin, and E. J. Loudenslager. 2005. Genetic analyses of juvenile steelhead, coastal cutthroat trout, and their hybrids differ substantially from field identifications. Transactions of the American Fisheries Society 134(4):829-840.

Campton, D. 2005a. Sperm competition in salmon hatcheries - the need to institutionalize genetically benign protocols: response to comment. Transactions of the American Fisheries Society (134).

Campton, D. E. 2005b. Sperm competition in salmon hatcheries - The need to institutionalize genetically benign spawning protocols: Response to comment. Transactions of the American Fisheries Society 134(6):1495-1498.

Campton, D. E., and L. R. Kaeding. 2005. Westslope cutthroat trout, hybridization, and the US Endangered Species Act. Conservation Biology 19(4):1323-1325.

DeHaan, P. W., and W. R. Ardren. 2005. Characterization of 20 highly variable tetranucleotide microsatellite loci for bull trout (Salvelinus confluentus) and cross-amplification in other Salvelinus species. Molecular Ecology Notes 5(3):582-585.

Gannam, A. 2005. Immunostimulants in fish diets. Pages 93-102 in Proceedings of the 1o Simpósio de Nutrição e Saúde de Peixes, Botucatu, Sao Paulo, Brazil.

Gharrett, A. J., A. P. Matala, E. L. Peterson, A. K. Gray, Z. Z. Li, and J. Heifetz. 2005. Two genetically distinct forms of rougheye rockfish are different species. Transactions of the American Fisheries Society 134(1):242-260.

Mobrand, L., J. Barr, L. Blankenship, D. Campton, T. Evelyn, T. Flagg, C. Mahnken, L. Seeb, P. Seidel, and W. Smoker. 2005. Hatchery reform in Washington state: principles and emerging issues. Fisheries 30(6):11-23.

Ostrand, K. G., S. J. Cooke, J. E. Garvey, and D. H. Wahl. 2005. The energetic impact of overwinter prey assemblages on age-0 largemouth bass. Environmental Biology of Fishes 72(3):305-311.

Ardren, W. R. 2004. Gene flow underwater. BioScience 54(5):463.

2004
Bauer, W. F., K. G. Ostrand, T. M. Sutton, and R. W. Greil. 2004. Changes in population structure of yellow perch following a manual removal. Pages 109-114 in Proceedings of the Indiana Academy of Science.

Campton, D. E. 2004. Sperm competition in salmon hatcheries: The need to institutionalize genetically benign spawning protocols. Transactions of the American Fisheries Society 133(5):1277-1289.

Gale, W. L., A. G. Maule, A. Postera, and M. H. Peters. 2004a. Acute exposure to gas - supersaturated water does not affect reproductive success of female adult Chinook salmon late in maturation. River Research and Applications 20(5):565-571.

Gale, W. L., R. Patino, and A. G. Maule. 2004b. Interaction of xenobiotics with estrogen receptors alpha and beta and a putative plasma sex hormone-binding globulin from channel catfish (Ictalurus punctatus). General and Comparative Endocrinology 136(3):338-345.

Matala, A. P., A. K. Gray, J. Heifetz, and A. J. Gharrett. 2004. Population structure of Alaskan shortraker rockfish, Sebastes borealis, inferred from microsatellite variation. Environmental Biology of Fishes 69:201-210.

Mesa, M. G., L. K. Weiland, and G. B. Zydlewski. 2004. Critical swimming speeds of wild bull trout. Northwest Science 78(1):59-65.

Odeh, M., R. M. Schrock, and A. L. Gannam. 2004. Comparative hydraulics of two fishery research circular tanks and recommendations for control of experimental bias. Journal of Applied Aquaculture 14(3/4):1-23.

Olson, D. E., B. Spateholts, M. Paiya, and D. E. Campton. 2004. Salmon hatcheries for the 21st Century: a model at Warm Springs National Fish Hatchery. Pages 581-598 in M. J. Nickum, P.M. Mazik, J.G. Nichum, and D.D. MacKinlay, editor Propagated Fish in Resource Management. American Fisheries Society Symposium 44. American Fisheries Society. Bethesda, Maryland.

Ostrand, K. G., and G. R. Wilde. 2004. Changes in prairie stream fish assemblages restricted to isolated streambed pools. Transactions of the American Fisheries Society 133(6):1329-1338.

Taylor, P. W. 2004. Detection of Flavobacterium psychrophilum in eggs and sexual fluids of Pacific Salmonids by a polymerase chain reaction assay: Implications for vertical transmission of bacterial coldwater disease. Journal of Aquatic Animal Health 16(2):104-108.

Tranah, G., D. E. Campton, and B. May. 2004. Genetic evidence for hybridization of pallid and shovelnose sturgeon. Journal of Heredity 95(6):474-480.

2003
Ardren, W. R., and A. R. Kapuscinski. 2003. Demographic and genetic estimates of effective population size (Ne) reveals genetic compensation in steelhead trout. Molecular Ecology 12(1):35-49.

Gomez-Uchida, D., E. A. Hoffman, W. R. Ardren, and M. A. Banks. 2003. Microsatellite markers for the heavily exploited canary (Sebastes pinniger) and other rockfish species. Molecular Ecology Notes 3(3):387-389.

Holt, R. A., P. W. Taylor, and J. M. Bertolini. 2003. Bacterial diseases of fish. Suggested Procedures for the Detection and Identification of Certain Finfish and Shellfish Pathogens, Blue Book 5th Edition, 2003, Fish Health Section. American Fisheries Society.

Jones, A. G., and W. R. Ardren. 2003. Methods of parentage analysis in natural populations. Molecular Ecology 12(10):2511-2523.

Taylor, P. W. 2003. Multiple antimicrobial resistance in a chronic bacterial infection of koi carp. North American Journal of Aquaculture 65(2):120-125.

Taylor, P. W., and A. E. Goodwin. 2003. Parasitic diseases of fish. Suggested Procedures for the Detection and Identification of Certain Finfish and Shellfish Pathogens. Blue Book 5th Edition, 2003, Fish Health Section, American Fisheries Society.

Zydlewski, G. B., J. S. Foott, K. Nichols, S. Hamelberg, J. Zydlewski, and B. T. Bjornsson. 2003. Enhanced smolt characteristics of steelhead trout exposed to alternative hatchery conditions during the final months of rearing. Aquaculture 222(1-4):101-117.

2002
Banks, J. L., and E. M. LaMotte. 2002. Effects of four density levels on tule fall chinook salmon during hatchery rearing and after release. North American Journal of Aquaculture 64(1):24-33.

Burger, C. 2002a. A global perspective on sustaining fisheries in the 21(st) century: transitioning beyond existing paradigms to an integrated, ecosystem approach. Fisheries Science 68:14-19.

Burger, C. V. 2002b. Education and exchange programs for international students in the U.S. - a brief overview. Fisheries Science 68(Supplement 1):1919-1921.

Campton, D. E., and D. E. Olson. 2002. Conservation role of salmon hatcheries: genetic integration versus segregation. Second International Symposium on Stock Enhancement and Sea Ranching, Kobe, Japan, Kobe, Japan.

Taylor, P. W., and J. R. Winton. 2002. Optimization of nested polymerase chain reaction assays for identification of Aeromonas salmonicida, Yersinia ruckeri, and Flavobacterium psychrophilum. Journal of Aquatic Animal Health 14(3):216-224.

Whipple, M. J., A. L. Gannam, and J. L. Bartholomew. 2002. Inability to control ceratomyxosis in rainbow trout and steelhead with oral treatments of glucan immunostimulant or the fumagillin analog TNP-470. North American Journal of Aquaculture 64(1):1-9.

Zydlewski, G. B., and J. R. Johnson. 2002. Response of bull trout fry to four types of water diversion screens. North American Journal of Fisheries Management 22(4):1276-1282.

Bartholomew, J. L., M. J. Whipple, and D. E. Campton. 2001. Inheritance of resistance to Ceratomyxa shasta in progeny from crosses between high- and low-susceptibility strains of rainbow trout Oncorhynchus mykiss. Bulletin of the National Research Institute of Aquaculture Supplement 5:71-75.

2001
Gannam, A. L., and R. M. Schrock. 2001. Immunostimulants in fish diets. Pages 235-266 in C. Limm, and C. D. Webster, editors. Nutrition and Fish Health. The Haworth Press, New York, New York.

Tranah, G. J., H. L. Kincaid, C. C. Krueger, D. E. Campton, and B. May. 2001. Reproductive isolation in sympatric populations of pallid and shovelnose sturgeon. North American Journal of Fisheries Management 21(2):367-373.

Zydlewski, G. B., A. Haro, K. G. Whalen, and S. D. McCormick. 2001. Performance of stationary and portable passive transponder detection systems for monitoring of fish movements. Journal of Fish Biology 58(5):1471-1475.

2000
Burger, C. V. 2000. The needs of salmon and steelhead in balancing their conservation and use. Pages 15-29 in E. E. Knudsen, C. R. Steward, D. D. MacDonald, J. E. Williams, and D. W. Reiser, editors. Sustainable Fisheries Management: Pacific Salmon. Lewis Publishers, CRC Press LLC, Boca Raton, FL.

Burger, C. V., K. T. Scribner, W. J. Spearman, C. O. Swanton, and D. E. Campton. 2000. Genetic contribution of three introduced life history forms of sockeye salmon to colonization of Frazer Lake, Alaska. Canadian Journal of Fisheries and Aquatic Sciences 57(10):2096-2111.

Campton, D. E., A. L. Bass, F. A. Chapman, and B. W. Bowen. 2000. Genetic distinction of pallid, shovelnose, and Alabama sturgeon: emerging species and the US Endangered Species Act. Conservation Genetics 1:17-32.

Pirhonen, J., C. B. Schreck, and A. Gannam. 2000. Appetite of chinook salmon (Oncorhynchus tshawytscha) naturally infected with bacterial kidney disease. Aquaculture 189(1-2):1-10.

Webster, C. D., K. R. Thompson, A. M. Morgan, E. J. Grisby, and A. L. Gannam. 2000a. Use of hempseed meal, poultry by-product meal, and canola meal in practical diets without fish meal for sunshine bass (Morone chrysops X M. saxatilis). Aquaculture 188(3-4):299-309.

Webster, C. D., L. G. Tiu, A. M. Morgan, and A. L. Gannam. 2000b. Differences in growth in blue catfish Ictalurus furcatus and channel catfish I. punctatus fed low-protein diets with and without supplemental methionine and/or lysine. Journal of the World Aquaculture Society 31(2):195-205.

1999
Gale, W. L., M. S. Fitzpatrick, M. Lucero, W. M. Contreras-Sanchez, and C. B. Schreck. 1999. Masculinization of Nile tilapia (Oreochromis niloticus) by immersion in androgens. Aquaculture 178(3-4):349-257.

Gannam, A. L., and R. M. Schrock. 1999. Immunostimulants in fish diets. Journal of Applied Aquaculture 9(4):53-89.

Taylor, P. W., and S. D. Roberts. 1999. Clove oil: An alternative anaesthetic for aquaculture. North American Journal of Aquaculture 61(2):150-155.

Webster, C. D., L. G. Tiu, A. M. Morgan, and A. Gannam. 1999. Effect of partial and total replacement of fish meal on growth and body composition of sunshine bass Morone chrysops x M. saxatilis fed practical diets. Journal of the World Aquaculture Society 30(4):443-453.

Campton, D. E. 1998. Pikefish, not pikeminnow. Fisheries 23(11):38.

1998
Rossi, A. R., M. Capula, D. Crosetti, D. E. Campton, and L. Sola. 1998a. Genetic divergence and phylogenetic inferences in five species of Mugilidae (Pisces: Perciformes). Marine Biology 131:213-218.

Rossi, A. R., M. Capula, D. Crosetti, L. Sola, and D. E. Campton. 1998b. Allozyme variation in global populations of striped mullet, Mugil cephalus (Pisces: mugilidae). Marine Biology 131(2):203-212.

1997
Burger, C. V., W. J. Spearman, and M. A. Cronin. 1997. Genetic differentiation of sockeye salmon subpopulations from a geologically young Alaskan lake system. Transactions of the American Fisheries Society 126(6):926-938.

Campton, D. E. 1997. Genetic effects of hatcheries on wild populations of Pacific salmon and steelhead: overview of fact and speculation. Pages 1-17 in E. L. Brannon, and W. C. Kinsel, editors. Proceedings of the Columbia River Anadromous Salmonid Rehabilitation and Passage Symposium. Aquaculture Research Institute, University of Idaho, Moscow, Idaho, Richland, WA.

Finn, J. E., C. V. Burger, and L. Holland-Bartels. 1997. Discrimination among populations of sockeye salmon fry with Fourier analysis of otolith banding patterns formed during incubation. Transactions of the American Fisheries Society 126:559-578.

Gannam, A. L. 1997. Development of open formula diets and new feeding strategies: A progress report. Pages 15-27 in R. Z. Smith, editor Proceedings of the 48th Northwest Fish Culture Conference. National Marine Fisheries Service, Portland, OR, Gleneden Beach, OR.

Waterstrat, P. R. 1997. Distribution and abundance of Saprolegnia in the water system of a Chinook salmon hatchery. Journal of Aquatic Animal Health 9(1):58-63.

1995
Campton, D. E. 1995. Genetic effects of hatchery fish on wild populations of Pacific salmon and steelhead: what do we really know? Pages 337-353 in H. J. Schramm, and R. G. Piper, editors. Uses and effect of cultured fishes in aquatic ecosystems.  American Fisheries Society, Symposium 15. American Fisheries Society, Bethesda, MD.

Waterstrat, P. R., and L. L. Marking. 1995. Clinical-evaluation of formalin, hydrogen-peroxide, and sodium-chloride for the treatment of saprolegnia-parasitica on fall chinook salmon eggs. Progressive Fish-Culturist 57(4):287-291.

Last updated: November 24, 2014
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